This page is a list of all software on which I've worked for research purposes (i.e. academia).

Profile HMM tools

My research with Profile HMMs necessitated the creation of a Profile HMM library and a couple programs that perform specific tasks using the library. I had to make the library since existing software is very specific to biological sequence analysis and difficult to adapt to our purposes.


Using a Perl script by my M.Sc. supervisor, Prof. Greg Kondrak, I put together a quick web interface to compare two strings via various string comparison methods.