METHOD                                  MEAN 	7.3.5.2	2.56.1.2 3.1.8.1 3.1.8.3 1.27.1.1 1.27.1.2 3.42.1.1 1.45.1.2 1.4.1.1 2.9.1.2 1.4.1.2 2.9.1.3 1.4.1.3 2.44.1.2 2.9.1.4 3.42.1.5 3.2.1.2 3.42.1.8 3.2.1.3 3.2.1.4 3.2.1.5 3.2.1.6 2.28.1.1 3.3.1.2 3.2.1.7 2.28.1.3 3.3.1.5 7.3.10.1 3.32.1.11 3.32.1.13 7.3.6.1 7.3.6.2 7.3.6.4 2.38.4.1 2.1.1.1 2.1.1.2	3.32.1.1 2.38.4.3 2.1.1.3 2.1.1.4 2.38.4.5 2.1.1.5 7.39.1.2 2.52.1.2 7.39.1.3 1.36.1.2 3.32.1.8	1.36.1.5 7.41.5.1 7.41.5.2 1.41.1.2 2.5.1.1 2.5.1.3 1.41.1.5
Mismatch Kernel+[PSI-BLAST]             0.5448	0.8000	0.1625	0.9629	0.6950	0.2467	0.4400	0.7500	0.4800	0.2471	0.2077	0.4400	0.9240	0.6733	1.0000	0.7000	0.0000	0.4680	0.3760	0.4733	0.7286	0.9171	0.4550	0.2733	0.0000	0.9600	0.3240	0.4963	0.4729	0.9267	0.4520	0.9911	0.6000	0.9640	0.4200	0.9072	0.9750	0.6275	0.0000	0.8850	0.5893	0.1100	0.2385	0.4543	0.1920	0.6378	0.3567	0.5680	0.0000	0.1343	0.2600	0.9967	0.8311	0.6343	0.9933
Improved Mismatch Kernel+[PSI-BLAST]    0.5630  0.8089  0.1775  0.9743  0.7225  0.2700  0.4314  0.7700  0.6000  0.2847  0.2092  0.6320  0.9480  0.8133  1.0000  0.7311  0.0185  0.4867  0.2360  0.4767  0.7400  0.9371  0.4500  0.2800       0  0.9650  0.3160  0.4550  0.4900  0.9867  0.4680  0.9956  0.6470   0.9680  0.4100  0.9088  0.9788  0.6250       0  0.8750  0.6043  0.1425   0.2523   0.4114  0.1920  0.6756  0.3767  0.7740       0  0.1229  0.2900  0.9900  0.8333  0.6514  0.9973
Profile Kernel[PSI-BLAST]               0.8441  0.8822  0.9975  1.0000  0.9275  0.8600  0.7971  0.9925  0.2400  0.5576  0.7600  0.6400  1.0000  1.0000  1.0000  0.8978  0.3262  0.9600  0.7480  0.5600  0.9857   0.9886  0.9650  0.8000  0.9800  0.9900  0.6920  0.9263  0.8486  0.9933  0.9520   1.0000  0.7826  0.9920  1.0000  0.9840  0.9838  0.8750  0.2880   1.0000  0.9621  0.6175  0.4108  0.8171  0.4120  0.7733  0.9033  1.0000   0.9167  0.8229  0.9000  1.0000  0.9244  0.9514  0.9947
Improved Profile Kernel[PSI-BLAST]      0.8588  0.9200  0.9975  1.0000  0.9200  0.8500  0.8000  0.9975  0.4600  0.5859  0.7646  0.6240  1.0000  1.0000  1.0000  0.8400  0.4123  0.9613  0.7520  0.6800  0.9857   0.9886  0.9700  0.9133  0.9800  0.9900  0.8360  0.9275  0.8564  0.9867  0.9520   1.0000  0.8470  0.9960  1.0000  0.9856  0.9900  0.8725  0.2960   1.0000  0.9664  0.6700  0.4162  0.7943  0.3280  0.7511  0.8867  1.0000   0.9700  0.8629  0.9000  1.0000  0.9400  0.9543  0.9947